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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78648098_78648708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78648098 - 78648708

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

TGTGGGCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATAATCACACTT

Flanking Amino Acid:

RTKIQGKRHRGQEDSSRGSD

Intron Amino Acid Position:

814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

57.9

46.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

70.3

0.46

61.1

44.7

Minor 5ss

30.6

-2.2

3.2

31.8

42.1

Minor BPS

-0.6

1.9

56.99

39.5

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102