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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78649631_78650195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78649631 - 78650195

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTCACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

AAATCATCAAAT

Flanking Amino Acid:

NSPGGDSASMELDKKANLLK

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

78.3

32.5

Major BPS

71.6

0.54

33.1

Major PPT

67.1

0.38

60.2

41.4

Minor 5ss

38.9

-1.3

2.9

44.3

43.6

Minor BPS

49.4

0.03

1.9

68.34

41.1

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102