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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78650308_78650914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78650308 - 78650914

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTGGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CTTTACTGATGG

Flanking Amino Acid:

VIQEGAEPFPVGSQLLKESE

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

82.9

36.2

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

66.3

0.37

61.8

39.9

Minor 5ss

38.7

-1.3

3.4

58.5

45.8

Minor BPS

43.7

-0.6

2.2

53.01

47.3

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102