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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78651124_78651236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78651124 - 78651236

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTAC

5'SS Class:

strong_major

3'SS Sequence:

GTTAACATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

GTGCTGTTAACA

Flanking Amino Acid:

KNMEEKNGFGDKSDPAAAAT

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.2

30.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

70.6

0.46

59.5

45.6

Minor 5ss

31.6

-2.1

3.2

40.1

46.3

Minor BPS

52.2

0.06

2.1

65.03

41.3

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102