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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78653291_78653619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78653291 - 78653619

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTGTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTC

U12 Branch Point Sequence:

TGTGTTTGTATA

Flanking Amino Acid:

PAPSQTLISSATYTQIQPHS

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

73.4

0.53

68.8

42.1

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

44.7

-0.4

1.7

55.65

38.2

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102