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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78654119_78656334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78654119 - 78656334

Intron Length:

2216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

TGTTCTGTATGT

Flanking Amino Acid:

NQSQAQMYLRVQNLAVRSQQ

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.1

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

71.5

0.48

62.5

44.3

Minor 5ss

31.7

-2.1

3.4

46.2

Minor BPS

46.4

-0.2

2.4

71.96

45.3

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002782

78647454 - 78660555

13102