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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78656485_78657260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78656485 - 78657260

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTCTGTTTTAAG

Flanking Amino Acid:

PQQTTTTQASINLATTSAAQ

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

78.3

37.9

Major BPS

75.8

0.64

65.8

Major PPT

78.5

0.64

82.8

32.6

Minor 5ss

39.3

-1.2

2.9

41.5

Minor BPS

45.7

-0.4

2.2

55.9

45.5

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102