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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78657339_78658506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78657339 - 78658506

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TTTTCAGGTACT

Flanking Amino Acid:

QLHSLAAVQQATIAASRQAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

0.74

0.8

77.3

30.7

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

45.6

-0.2

2.6

78.39

43.3

Associated Gene:

Gene:

PHC1

Ensembl Gene ID:

ENSAPLG00000002713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020347

78647114 - 78660555

13442

ENSAPLT00000002782

78647454 - 78660555

13102