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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78720107_78720505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78720107 - 78720505

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTATGCTGATGC

Flanking Amino Acid:

KTHTSLLCPKGTSASETITF

Intron Amino Acid Position:

932

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

78.9

0.65

0.9

72.7

37.5

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

41.2

-0.6

2.2

51.61

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015239

78703733 - 78731693

27961