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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78721608_78722254_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78721608 - 78722254

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTTTCTTCACCC

Flanking Amino Acid:

FGEGSEPGNTWLTALVLKTF

Intron Amino Acid Position:

1046

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

69.9

0.45

0.9

61.5

40.1

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

63.3

0.4

1.8

78.34

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015239

78703733 - 78731693

27961