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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78726742_78728998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78726742 - 78728998

Intron Length:

2257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGGTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CTGGCTGTAATC

Flanking Amino Acid:

ADRVVLYLEELTRQPHAYTL

Intron Amino Acid Position:

1417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.5

26.8

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

70.4

0.46

0.9

68.4

37.4

Minor 5ss

28.3

-2.5

3.1

31.2

36.7

Minor BPS

47.2

-0.2

2.1

56.79

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015239

78703733 - 78731693

27961