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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78767086_78767281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78767086 - 78767281

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

GCAAATGTAATT

Flanking Amino Acid:

NAYGGFASTQDTVVALQALA

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.1

69.7

43.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.97

0.6

91.8

19.1

Minor 5ss

45.1

-0.5

2.6

58.7

45.8

Minor BPS

42.6

-0.4

54.88

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031102

78673445 - 78768226

94782