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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78809838_78810081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78809838 - 78810081

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

AACTCTTTGAAT

Flanking Amino Acid:

QRLNSSTCRKGFSASAGCVL

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

66.1

40.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

0.92

0.6

85.6

29.2

Minor 5ss

35.3

-1.7

3.4

47.8

47.6

Minor BPS

0.43

1.4

71.09

39.8

Associated Gene:

Gene:

RIMKLB

Ensembl Gene ID:

ENSAPLG00000014066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025909

78809659 - 78868036

58378