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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78822652_78824168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78822652 - 78824168

Intron Length:

1517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGAAAA

5'SS Class:

major

3'SS Sequence:

CCACTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATAGAT

U12 Branch Point Sequence:

TTTTTCCCACTT

Flanking Amino Acid:

DGRMQSNCSLGGVGMMCSLS

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

69.6

36.5

Major BPS

53.6

0.09

1.3

52.7

43.2

Major PPT

78.4

0.64

0.8

72.4

Minor 5ss

31.5

-2.1

3.2

36.3

Minor BPS

48.5

-0

2.1

76.34

40.7

Associated Gene:

Gene:

RIMKLB

Ensembl Gene ID:

ENSAPLG00000014066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025909

78809659 - 78868036

58378

ENSAPLT00000014653

78822188 - 78868404

46217