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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78824373_78828470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78824373 - 78828470

Intron Length:

4098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCACACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTCTTCACA

Flanking Amino Acid:

MVVKNTRGHRGKAVFLARDK

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.7

0.8

76.8

30.8

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

75.4

0.79

1.7

86.69

32.1

Associated Gene:

Gene:

RIMKLB

Ensembl Gene ID:

ENSAPLG00000014066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025909

78809659 - 78868036

58378

ENSAPLT00000014653

78822188 - 78868404

46217