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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78830585_78861262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78830585 - 78861262

Intron Length:

30678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGGATG

5'SS Class:

major

3'SS Sequence:

TTTCCTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATGTTCTTATTT

Flanking Amino Acid:

VVLTIEDGNLGLRVNGELIT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

0.9

71.3

40.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.1

0.81

0.6

85.4

21.9

Minor 5ss

30.6

-2.2

3.2

36.5

41.9

Minor BPS

64.5

0.53

1.6

77.51

39.6

Associated Gene:

Gene:

RIMKLB

Ensembl Gene ID:

ENSAPLG00000014066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014653

78822188 - 78868404

46217

ENSAPLT00000025909

78809659 - 78868036

58378