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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78861487_78867894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

78861487 - 78867894

Intron Length:

6408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCACCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TGTACTCTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

42.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

63.9

0.31

0.9

54.9

35.2

Minor 5ss

42.6

-0.8

3.1

56.9

41.9

Minor BPS

61.8

0.37

1.7

73.91

37.3

Associated Gene:

Gene:

RIMKLB

Ensembl Gene ID:

ENSAPLG00000014066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025909

78809659 - 78868036

58378

ENSAPLT00000014653

78822188 - 78868404

46217