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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78961489_78962509_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

78961489 - 78962509

Intron Length:

1021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCGGCGCCCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTACAC

U12 Branch Point Sequence:

CCGCCCTACACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

49.2

-0

1.1

58.3

36.8

Major PPT

59.2

0.21

0.9

53.7

36.6

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

43.5

-0.6

2.1

43.78

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017209

78961440 - 78966056

4617