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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78971783_78972802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78971783 - 78972802

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAACGTG

5'SS Class:

major

3'SS Sequence:

CTTCCCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTTTGCTGATAT

Flanking Amino Acid:

AVALGLTYQQVKTWFQNRRM

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

65.5

40.5

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

70.9

0.47

0.8

62.9

33.4

Minor 5ss

33.9

-1.8

3.5

45.9

49.3

Minor BPS

46.5

-0.1

2.2

69.97

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014451

78970872 - 78975763

4892