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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78997550_78997941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78997550 - 78997941

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTTAT

5'SS Class:

major

3'SS Sequence:

CTTCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GGTATCTGACTT

Flanking Amino Acid:

LSQQLSGINAVFYYSTGIFE

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

73.4

33.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.8

0.78

0.7

80.7

24.5

Minor 5ss

39.3

-1.2

3.1

45.5

Minor BPS

47.1

-0.1

1.7

62.85

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014221

78995058 - 79003774

8717

ENSAPLT00000027151

78995058 - 79023497

28440