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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78998130_78998781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78998130 - 78998781

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

ATTTTTCTACCT

Flanking Amino Acid:

NKMEEEKAQAVLQKLRGTQD

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

83.9

0.76

0.8

77.4

31.5

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

54.1

0.21

1.9

78.25

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027151

78995058 - 79023497

28440

ENSAPLT00000014221

78995058 - 79003774

8717