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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78999370_78999615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78999370 - 78999615

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

ATCTTGTTACCT

Flanking Amino Acid:

SVSLFVNRFGRRNSMLLVNV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

77.2

0.61

73.7

36.9

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

49.5

0.04

2.3

73.16

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027151

78995058 - 79023497

28440

ENSAPLT00000014221

78995058 - 79003774

8717