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Intron Name: Anas_platyrhynchos_platyrhynchos_1_78999777_79001044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78999777 - 79001044

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

AGGATTGTAACC

Flanking Amino Acid:

NTGVINAPEKIIQAFYNRTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

88.7

0.87

0.7

83.9

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

45.9

-0.3

53.33

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027151

78995058 - 79023497

28440

ENSAPLT00000014221

78995058 - 79003774

8717