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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79001141_79003759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79001141 - 79003759

Intron Length:

2619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

AACAAATTAACC

Flanking Amino Acid:

MADKKKITAPLIYAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

48.5

-0.1

1.8

57.54

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014221

78995058 - 79003774

8717