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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79126185_79126580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79126185 - 79126580

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CGTTTAATTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

AATTTCTTACCC

Flanking Amino Acid:

SQASINNAGFAFPDWCSNID

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

70.6

41.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

76.6

0.6

0.9

66.9

42.9

Minor 5ss

33.7

-1.9

2.9

38.1

40.9

Minor BPS

66.8

0.51

1.6

73.55

37.1

Associated Gene:

Gene:

FOXJ2

Ensembl Gene ID:

ENSAPLG00000013506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031693

79118513 - 79132806

14294

ENSAPLT00000014089

79119948 - 79150498

30551