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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79129001_79129330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79129001 - 79129330

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTGGTCCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAA

U12 Branch Point Sequence:

AAGGCCTTATTT

Flanking Amino Acid:

STAPIANYSQQAAGPVDVAS

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

60.9

0.27

1.3

64.3

39.6

Major PPT

74.5

0.55

41.4

Minor 5ss

35.7

-1.6

48.8

Minor BPS

54.6

0.22

1.7

67.22

43.9

Associated Gene:

Gene:

FOXJ2

Ensembl Gene ID:

ENSAPLG00000013506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031693

79118513 - 79132806

14294

ENSAPLT00000014089

79119948 - 79150498

30551