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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79129902_79131836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79129902 - 79131836

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ACTGCAGTAATT

Flanking Amino Acid:

VPRPRDDPGKGSYWTIDTCP

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

86.7

0.82

0.7

84.4

30.6

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

46.5

-0.1

2.3

66.91

44.3

Associated Gene:

Gene:

FOXJ2

Ensembl Gene ID:

ENSAPLG00000013506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031693

79118513 - 79132806

14294

ENSAPLT00000014089

79119948 - 79150498

30551