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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7917320_7917701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7917320 - 7917701

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

GTTCCCATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTTTAATAAAA

Flanking Amino Acid:

EGADTHFDELQDIFLLSTRD

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.4

65.9

42.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

77.2

0.61

0.9

69.6

35.4

Minor 5ss

40.5

-1.1

2.8

44.7

43.5

Minor BPS

49.3

-0

1.9

67.75

37.6

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026447

7851439 - 7952258

100820

ENSAPLT00000010992

7837968 - 7952258

114291