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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79270395_79270910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79270395 - 79270910

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CTTCCCTTAACA

Flanking Amino Acid:

QQNKYNITSKRNGVAKVNIF

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

77.5

0.62

0.8

30.4

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

82.8

1.03

1.1

85.03

34.5

Associated Gene:

Gene:

SCNN1A

Ensembl Gene ID:

ENSAPLG00000012377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012940

79264767 - 79271529

6763