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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79285876_79286012_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
79285876 - 79286012

Intron Length:
137

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGCGCC

5'SS Class:
major

3'SS Sequence:
TTTCTCTTGGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTCCAC

U12 Branch Point Sequence:
CTCGTCTCACCC

Flanking Amino Acid:
FGVYDNVGILGGFKMHPKDL

Intron Amino Acid Position:
12

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.57
1
60.2
39.4

Major BPS
67.4
0.43
1.3
78.4
35.2

Major PPT
82.8
0.74
0.9
80.7
31.3

Minor 5ss
31.7
-2.1
3.2
34
41.8

Minor BPS
45.2
-0.3
1.9
53.1
45.1

Associated Gene:

Gene:
MRPL51

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

79285589 - 79286546
958