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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79288442_79288758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79288442 - 79288758

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGGAG

5'SS Class:

major

3'SS Sequence:

TGTGTGGCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

CAGTAGTGAAGC

Flanking Amino Acid:

WGGVVEEDFVNLVTGVCYRI

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

66.8

38.9

Major BPS

64.3

0.35

1.2

55.4

Major PPT

66.5

0.37

62.5

44.3

Minor 5ss

30.3

-2.3

3.5

37.6

41.6

Minor BPS

38.3

-0.9

2.3

45.02

Associated Gene:

Gene:

NCAPD2

Ensembl Gene ID:

ENSAPLG00000013121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013732

79286407 - 79307055

20649