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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79289096_79289176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79289096 - 79289176

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CTTGTGTCATCT

Flanking Amino Acid:

GLKSIVGELLREIGQKNPQD

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

84.3

0.77

0.8

80.4

31.6

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

41.6

-0.5

2.4

62.9

47.5

Associated Gene:

Gene:

NCAPD2

Ensembl Gene ID:

ENSAPLG00000013121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013732

79286407 - 79307055

20649