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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79291135_79291735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79291135 - 79291735

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCATTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATTATAG

Flanking Amino Acid:

EMRDRCRETAAPAITPEEEW

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

79.6

0.67

0.8

74.1

35.4

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

50.1

-0.1

63.12

Associated Gene:

Gene:

NCAPD2

Ensembl Gene ID:

ENSAPLG00000013121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013732

79286407 - 79307055

20649