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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79298927_79299029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79298927 - 79299029

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAC

U12 Branch Point Sequence:

GTTTTCTCATCA

Flanking Amino Acid:

FGYLTEAVSKGFVQPSGDWI

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

73.7

33.1

Major BPS

55.1

0.13

1.2

66.7

Major PPT

79.6

0.67

0.9

78.9

34.4

Minor 5ss

38.7

-1.3

2.9

47.9

47.8

Minor BPS

57.9

0.24

1.8

72.16

39.8

Associated Gene:

Gene:

NCAPD2

Ensembl Gene ID:

ENSAPLG00000013121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013732

79286407 - 79307055

20649