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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79306139_79306379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79306139 - 79306379

Intron Length:

241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

ACATCTATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

TTACATCTATCC

Flanking Amino Acid:

RRVPSKPENKALAEELEQRL

Intron Amino Acid Position:

1273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

76.2

39.3

Major BPS

0.37

1.3

Major PPT

68.1

0.41

0.9

58.8

Minor 5ss

37.6

-1.4

3.3

41.4

Minor BPS

44.3

-0.4

58.71

39.6

Associated Gene:

Gene:

NCAPD2

Ensembl Gene ID:

ENSAPLG00000013121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013732

79286407 - 79307055

20649