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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79306501_79306611_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79306501 - 79306611

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTCC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTTCCCTTTTTT

Flanking Amino Acid:

PMPAKRRPTAASSRRQPLST

Intron Amino Acid Position:

1313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

68.5

37.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

60.9

0.37

1.9

71.4

38.7

Minor BPS

45.4

-0.2

3.6

81.55

40.1

Associated Gene:

Gene:

NCAPD2

Ensembl Gene ID:

ENSAPLG00000013121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013732

79286407 - 79307055

20649