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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7930811_7934007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7930811 - 7934007

Intron Length:

3197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTG

5'SS Class:

strong_major

3'SS Sequence:

ACATTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

ACTTGCTAAACA

Flanking Amino Acid:

GQYDVIFLGTDVGTVLKVVS

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

68.1

42.8

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

76.4

0.59

73.2

41.2

Minor 5ss

41.7

-0.9

3.1

48.1

Minor BPS

55.5

0.17

2.1

69.2

43.4

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010992

7837968 - 7952258

114291

ENSAPLT00000026447

7851439 - 7952258

100820