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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79317611_79317695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79317611 - 79317695

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CATCTATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TCTTGTAGAACA

Flanking Amino Acid:

INGNAITIFQERDPSNIKWA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

73.3

0.52

0.9

35.1

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

47.3

-0.2

2.1

64.78

41.8

Associated Gene:

Gene:

TAPBPL

Ensembl Gene ID:

ENSAPLG00000013511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023369

79316282 - 79396324

80043

ENSAPLT00000044654

79316282 - 79390586

74305

ENSAPLT00000020082

79316282 - 79365780

49499

ENSAPLT00000039689

79314082 - 79319774

5693

ENSAPLT00000014139

79316282 - 79356903

40622

ENSAPLT00000037890

79316282 - 79391134

74853

ENSAPLT00000025992

79316282 - 79329989

13708