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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79318074_79318182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79318074 - 79318182

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TCTGGCTGATAT

Flanking Amino Acid:

EKYDKSLKIVSNASCTTNCL

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

85.6

0.8

0.7

84.5

23.3

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

42.4

-0.4

2.2

61.64

47.8

Associated Gene:

Gene:

TAPBPL

Ensembl Gene ID:

ENSAPLG00000013511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014139

79316282 - 79356903

40622

ENSAPLT00000037890

79316282 - 79391134

74853

ENSAPLT00000025992

79316282 - 79329989

13708

ENSAPLT00000023369

79316282 - 79396324

80043

ENSAPLT00000020082

79316282 - 79365780

49499

ENSAPLT00000039689

79314082 - 79319774

5693