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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79318265_79318425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79318265 - 79318425

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GTGTTCTCACTG

Flanking Amino Acid:

DNFGIVEGLMTTVHAITATQ

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

0.87

0.8

85.6

Major PPT

0.56

0.7

69.2

24.6

Minor 5ss

-1.4

47.2

42.5

Minor BPS

46.8

-0.3

1.9

51.5

43.5

Associated Gene:

Gene:

TAPBPL

Ensembl Gene ID:

ENSAPLG00000013511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023369

79316282 - 79396324

80043

ENSAPLT00000020082

79316282 - 79365780

49499

ENSAPLT00000039689

79314082 - 79319774

5693

ENSAPLT00000014139

79316282 - 79356903

40622

ENSAPLT00000037890

79316282 - 79391134

74853

ENSAPLT00000025992

79316282 - 79329989

13708