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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79318578_79318713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79318578 - 79318713

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

TCCCTGCTGACT

Flanking Amino Acid:

AVGKVIPELNGKLTGMAFRV

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

80.1

0.68

0.9

73.9

36.1

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

42.6

-0.5

2.3

60.49

43.5

Associated Gene:

Gene:

TAPBPL

Ensembl Gene ID:

ENSAPLG00000013511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037890

79316282 - 79391134

74853

ENSAPLT00000025992

79316282 - 79329989

13708

ENSAPLT00000020082

79316282 - 79365780

49499

ENSAPLT00000014139

79316282 - 79356903

40622

ENSAPLT00000039689

79314082 - 79319774

5693