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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79318578_79396257_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79318578 - 79396257

Intron Length:

77680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGGAAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

CCCAACTTAAGA

Flanking Amino Acid:

AVGKVIPELNGKLWGQSTSL

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

47.8

-0.1

1.8

54.4

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

47.2

-0.2

1.9

52.35

45.6

Associated Gene:

Gene:

TAPBPL

Ensembl Gene ID:

ENSAPLG00000013511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023369

79316282 - 79396324

80043