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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79318793_79319053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79318793 - 79319053

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGCCTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TCTTTCTTAACT

Flanking Amino Acid:

VDLTCRLEKPAKYDDIKRVV

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

82.2

0.8

71.9

35.8

Major PPT

77.1

0.61

0.8

76.3

32.2

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

87.9

1.27

0.9

95.32

31.5

Associated Gene:

Gene:

TAPBPL

Ensembl Gene ID:

ENSAPLG00000013511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025992

79316282 - 79329989

13708

ENSAPLT00000020082

79316282 - 79365780

49499

ENSAPLT00000014139

79316282 - 79356903

40622

ENSAPLT00000039689

79314082 - 79319774

5693

ENSAPLT00000037890

79316282 - 79391134

74853