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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79319138_79319274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79319138 - 79319274

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TTGACCATATTC

Flanking Amino Acid:

KGILAYTEDQVVSCDFNGDS

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

81.7

0.71

0.9

80.3

31.7

Minor 5ss

-1.9

3.2

43.9

Minor BPS

49.2

-0

1.9

64.04

41.7

Associated Gene:

Gene:

TAPBPL

Ensembl Gene ID:

ENSAPLG00000013511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039689

79314082 - 79319774

5693

ENSAPLT00000025992

79316282 - 79329989

13708

ENSAPLT00000020082

79316282 - 79365780

49499

ENSAPLT00000014139

79316282 - 79356903

40622