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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7934097_7935966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7934097 - 7935966

Intron Length:

1870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTATTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ACTTTCCTAACT

Flanking Amino Acid:

VVLEELQIFKHPSFISTMEI

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

79.8

0.67

0.8

77.6

35.8

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

67.8

0.64

1.7

82.68

38.5

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026447

7851439 - 7952258

100820

ENSAPLT00000010992

7837968 - 7952258

114291