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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79344704_79344971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79344704 - 79344971

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CGTCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

ATAACTCTAAAT

Flanking Amino Acid:

SNCDGRQFPKVLGGFDRVLL

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

34.6

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

73.1

0.52

0.9

65.6

36.1

Minor 5ss

40.4

-1.1

2.9

53.8

43.4

Minor BPS

50.6

0.1

1.8

70.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033502

79342422 - 79349654

7233