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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79353177_79353361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79353177 - 79353361

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

CTTCCTGTGATG

Flanking Amino Acid:

IGVMSLIRKKVQEFEHVNGR

Intron Amino Acid Position:

1306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

46.6

-0.4

2.1

55.03

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023080

79349353 - 79378047

28695

ENSAPLT00000014884

79349353 - 79365780

16428