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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7936009_7937255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7936009 - 7937255

Intron Length:

1247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCACA

5'SS Class:

strong_major

3'SS Sequence:

GCCTGATTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TTTGCCTGATTT

Flanking Amino Acid:

ISTMEISQKQQQLYIGSRDG

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

73.5

37.2

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

72.7

0.51

40.3

Minor 5ss

39.7

-1.2

2.8

50.3

45.6

Minor BPS

59.2

0.37

1.8

80.66

41.5

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026447

7851439 - 7952258

100820

ENSAPLT00000010992

7837968 - 7952258

114291