Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79362968_79363884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79362968 - 79363884

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

TCTAACTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATCTGTCTAACT

Flanking Amino Acid:

NGEWLCPRCTCPALKGKVQK

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.2

36.4

Major BPS

0.72

78.4

31.2

Major PPT

76.6

0.6

0.8

73.7

36.4

Minor 5ss

44.4

-0.6

2.8

40.1

Minor BPS

51.9

0.14

2.1

74.59

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023080

79349353 - 79378047

28695

ENSAPLT00000014884

79349353 - 79365780

16428