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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79365479_79378004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79365479 - 79378004

Intron Length:

12526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GCCGCCGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAG

U12 Branch Point Sequence:

TTCAGGTGCATC

Flanking Amino Acid:

AARGAAAAAAAVAVVESMVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.2

Major BPS

0.05

1.6

63.1

44.4

Major PPT

62.3

0.28

53.5

36.6

Minor 5ss

32.8

-2

2.7

42.5

44.3

Minor BPS

34.5

-1.2

2.5

47.09

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023080

79349353 - 79378047

28695